Value added tax (VAT) is a significant source of revenue for the UK Government. With the UK continuing to feel the effects of recent economic shocks, it is no surprise that HMRC is focused on securing as much VAT as legally possible. Charities and the not-for-profit sector are in the spotlight.

HMRC is increasingly passing the responsibility for VAT compliance back on to businesses, organisations, and their advisors. Those operating in the charity and not-for-profit sector often face the most complex VAT challenges.

HMRC VAT compliance updates for charities

HMRC has recently launched a campaign targeting smaller charities with turnovers of up to £2 million. These organisations are subject to output and input VAT implications related to:

  • Whether funding is for a business supply (potentially subject to VAT) or for a grant (non-business activity)
  • Recover the VAT incurred on costs that relate to business activities

Key areas for VAT compliance review

We recommend organisations act now and conduct a full review of their VAT accounting policies to reduce the risk of non-compliance and potential errors.

Undergoing an HMRC compliance check can be daunting. Common areas of review for charities and not-for-profit entities often include:

  • Identification of the correct VAT treatment for supplies made
  • Review of business and non-business income streams
  • Review of input VAT recovery and partial exemption position
  • VAT registration threshold
  • VAT reliefs/exemptions for charities
  • Trading subsidiaries of the charity
  • Whether VAT exemption conditions are met
  • Record keeping and VAT accounting policies

We are passionate about supporting our charity and not-for-profit clients. Our expert team has assisted many clients in evaluating the impact of VAT on their charitable operations. We want to support you with your VAT compliance but also identify opportunities to manage the impact of VAT on your organisation.

We offer a comprehensive charity VAT review which can be tailored to your organisation. You can get in touch here.

Latest news

Three people in business attire are seated at a desk in an office, reviewing a document together. The person on the left is pointing at the document while the other two look on attentively.

Making tax digital for income tax: All you need to know

6 February 2026

Read

PKF Francis Clark and Wansbroughs to exhibit at Cereals 2026

4 February 2026

Read

Succession and exit planning guide for business owners

4 February 2026

Read

UK business offshoring: Key tax risks you need to know

30 January 2026

Read
Female small business owner, working in her shop

Changes to small company accounts filing delayed

30 January 2026

Read
Will Birchall, Darren Phillips and Sam Willis at PKF Francis Clark's Southampton office

Key appointments in Southampton strengthen our corporate finance team

27 January 2026

Read
Two men in suits discussing a business transaction.

Missed returns: Your guide to HMRC penalties

23 January 2026

Read
Three individuals in business attire are seated around a table, engaged in a discussion while looking at a laptop and holding documents with charts.

Audit reform bill has been dropped: What happens next?

21 January 2026

Read
Portrait of Andrew Killick, partner and head of corporate finance at PKF Francis Clark, smiling in a professional setting.

Our survey predicts renewed deals activity in 2026

21 January 2026

Read
Two businessmen shaking hands on a transaction

UK debt market 2025: a strategic window for growth

14 January 2026

Read
Two colleagues chatting whilst walking from a meeting room.

The Ministry of Justice’s interest seizure plan: A threat to law firm stability?

13 January 2026

Read
Three people in business attire are seated at a desk in an office, reviewing a document together. The person on the left is pointing at the document while the other two look on attentively.

Succession and exit planning – how MVLs offer a tax-efficient route

13 January 2026

Read